6VJ8
Crystal structure of GlpG in complex with peptide chloromethylketone inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE F1 |
Synchrotron site | CHESS |
Beamline | F1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-07 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.972 |
Spacegroup name | H 3 2 |
Unit cell lengths | 110.049, 110.049, 127.311 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 50.010 - 2.300 |
R-factor | 0.21983 |
Rwork | 0.218 |
R-free | 0.25225 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ic8 |
RMSD bond length | 0.019 |
RMSD bond angle | 2.390 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 76.330 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.097 | 0.568 |
Number of reflections | 13264 | 1293 |
<I/σ(I)> | 13.3 | |
Completeness [%] | 99.1 | |
Redundancy | 10.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 0.1 M Tris, pH 8.5, 3 M sodium nitrate, 15% glycerol |