6VIU
HLA-B*15:02 complexed with a synthetic peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-09-19 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.92013 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 51.359, 81.572, 111.072 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.184 - 2.334 |
R-factor | 0.1827 |
Rwork | 0.176 |
R-free | 0.24330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1xr8 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.680 | 2.480 |
High resolution limit [Å] | 2.200 | 2.370 |
Rmerge | 0.109 | |
Rmeas | 0.060 | |
Number of reflections | 24726 | 2425 |
<I/σ(I)> | 8.3 | |
Completeness [%] | 99.9 | |
Redundancy | 2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 0.2 ammonium acetate, 0.M tri-sodium citrate dihydrate pH5.6, 30% w/v PEG4000 |