6VHZ
Klebsiella oxytoca NpsA N-terminal subdomain in complex with anthranilyl-AMSN
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-07 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 77.013, 61.408, 80.518 |
Unit cell angles | 90.00, 100.43, 90.00 |
Refinement procedure
Resolution | 50.370 - 2.120 |
R-factor | 0.2039 |
Rwork | 0.203 |
R-free | 0.22730 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6vhu |
RMSD bond length | 0.007 |
RMSD bond angle | 0.811 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.15_3459) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 79.190 | 2.160 |
High resolution limit [Å] | 2.120 | 2.120 |
Rmeas | 0.060 | 0.861 |
Rpim | 0.023 | 0.332 |
Number of reflections | 38904 | 2036 |
<I/σ(I)> | 17.5 | 2.2 |
Completeness [%] | 92.1 | 97.6 |
Redundancy | 6.7 | 6.6 |
CC(1/2) | 0.999 | 0.852 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | well solution: 100 mM HEPES pH 7.5, 150 mM KBr, 30% w/v PEG3350 protein solution (15 mg/mL): 50 mM HEPES pH 8.0, 150 mM NaCl, 0.2 mM TCEP hanging drops: 1 uL protein solution, 1 uL well solution |