Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6VF5

DNA Polymerase Mu, 8-oxorGTP:At Product State Ternary Complex, 50 mM Mn2+ (120 min)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2018-05-03
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.00
Spacegroup nameP 21 21 21
Unit cell lengths59.982, 68.718, 110.413
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.620 - 1.600
R-factor0.1661
Rwork0.165
R-free0.19100
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4m04
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.15.2_3472)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.630
High resolution limit [Å]1.6004.3401.600
Rmerge0.0730.0500.877
Rmeas0.0820.0550.992
Rpim0.0350.0240.456
Total number of observations310821
Number of reflections6036531452953
<I/σ(I)>12.2
Completeness [%]99.195.898.1
Redundancy5.15.14.5
CC(1/2)0.9960.622
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.527785-90mM HEPES pH 7.5, 17-18% PEG4000

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon