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6VDZ

Crystal structure of reduced SfmD by soaking with sodium hydrosulfite

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyPIXEL
Collection date2019-12-18
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9795
Spacegroup nameP 31 2 1
Unit cell lengths59.883, 59.883, 160.744
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution49.360 - 2.950
R-factor0.2663
Rwork0.260
R-free0.32540
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6vdp
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHENIX
Refinement softwarePHENIX (1.17.1-3660)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0003.000
High resolution limit [Å]2.9508.0002.950
Rmerge0.0820.0571.510
Rmeas0.0880.0611.606
Rpim0.0300.0210.534
Total number of observations58396
Number of reflections7467442372
<I/σ(I)>8.1
Completeness [%]99.099.199.5
Redundancy7.87.88
CC(1/2)0.9970.919
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2950.1 M Tris pH 8.5, 0.2 M magnesium chloride, 30% PEG 4000

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