6VDF
Structure of the periplasmic domain of YejM from Salmonella typhimurium (twinned)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 4.2.2 |
| Synchrotron site | ALS |
| Beamline | 4.2.2 |
| Temperature [K] | 80 |
| Detector technology | CMOS |
| Collection date | 2016-06-06 |
| Detector | RDI CMOS_8M |
| Wavelength(s) | 1.001 |
| Spacegroup name | P 1 |
| Unit cell lengths | 42.948, 42.957, 181.209 |
| Unit cell angles | 94.28, 94.02, 111.78 |
Refinement procedure
| Resolution | 59.900 - 1.920 |
| R-factor | 0.22 |
| Rwork | 0.211 |
| R-free | 0.26140 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6vat |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 59.900 | 1.989 |
| High resolution limit [Å] | 1.920 | 1.920 |
| Rmerge | 0.091 | 0.762 |
| Rpim | 0.758 | |
| Number of reflections | 70265 | 5489 |
| <I/σ(I)> | 7.3 | 1.07 |
| Completeness [%] | 77.2 | 60.59 |
| Redundancy | 1.6 | 1.4 |
| CC(1/2) | 0.971 | 0.191 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 291 | 0.1 M HEPES pH 7.0, 9 % PEG3350 |






