6VD3
Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Mesoporphyrin IX and Substrate 4-bromophenol
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-06-16 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.656, 67.432, 67.547 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.770 - 1.670 |
Rwork | 0.168 |
R-free | 0.18840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ixf |
RMSD bond length | 0.009 |
RMSD bond angle | 1.730 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 33.770 | 1.710 |
High resolution limit [Å] | 1.670 | 1.670 |
Number of reflections | 31197 | 2039 |
<I/σ(I)> | 28.6 | |
Completeness [%] | 94.5 | |
Redundancy | 4.4 | |
CC(1/2) | 0.997 | 0.746 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 277 | 0.2 M Ammonium Sulfate, MPEG 2000, 29-33% |