6VC3
Peanut lectin complexed with S-beta-D-thiogalactopyranosyl 6-deoxy-6-S-propynyl-beta-D-glucopyranoside (STG)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-26 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9801 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 76.190, 125.418, 128.112 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.030 - 1.950 |
R-factor | 0.268 |
Rwork | 0.267 |
R-free | 0.28300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2pel |
RMSD bond length | 0.010 |
RMSD bond angle | 1.190 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.030 | 1.990 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.120 | 0.802 |
Rmeas | 0.127 | 0.846 |
Rpim | 0.039 | 0.254 |
Number of reflections | 82675 | 4496 |
<I/σ(I)> | 10.7 | 2 |
Completeness [%] | 92.8 | 95.7 |
Redundancy | 9.3 | 9.6 |
CC(1/2) | 0.997 | 0.757 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 294 | 15% (w/v) PEG 8000, 0.1 sodium citrate, 0.125M ammonium sulfate |