6VBB
2.60 Angstrom Resolution Crystal Structure of Peptidase S41 from Acinetobacter baumannii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-10-17 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97856 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 136.311, 102.525, 68.035 |
Unit cell angles | 90.00, 116.28, 90.00 |
Refinement procedure
Resolution | 29.430 - 2.600 |
R-factor | 0.1859 |
Rwork | 0.183 |
R-free | 0.23740 |
Structure solution method | SAD |
RMSD bond length | 0.005 |
RMSD bond angle | 1.336 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.640 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.100 | 0.757 |
Rmeas | 0.114 | 0.864 |
Rpim | 0.054 | 0.412 |
Number of reflections | 26039 | 1279 |
<I/σ(I)> | 15.5 | 2.1 |
Completeness [%] | 100.0 | 100 |
Redundancy | 4.4 | 4.4 |
CC(1/2) | 0.804 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 292 | Protein: 12.5 mg/ml, 0.5M Sodium chloride, 0.01M Tris pH 8.3; Screen: Classics II (F2), 0.2M Trimethylamine N-oxide, 0.1M Tris pH 8.5, 25% (w/v) PEG 2000 MME. |