6VB5
HLA-B*15:02 complexed with a synthetic peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-18 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.92011 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 50.825, 81.277, 109.430 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.754 - 2.150 |
R-factor | 0.1743 |
Rwork | 0.171 |
R-free | 0.22390 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1xr8 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.640 | 2.200 |
High resolution limit [Å] | 2.050 | 2.050 |
Rmerge | 0.206 | |
Rmeas | 0.052 | |
Number of reflections | 29241 | 2901 |
<I/σ(I)> | 12 | |
Completeness [%] | 99.6 | |
Redundancy | 2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 0.2 ammonium acetate, 0.M tri-sodium citrate dihydrate pH5.6, 30% w/v PEG4000 |