6VB0
HLA-B*15:02 complexed with a synthetic peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-27 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.92013 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 50.821, 81.265, 110.662 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.022 - 1.900 |
R-factor | 0.1685 |
Rwork | 0.166 |
R-free | 0.21340 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1xr8 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.030 | 1.970 |
High resolution limit [Å] | 1.830 | 1.890 |
Rmerge | 0.167 | |
Rmeas | 0.044 | |
Number of reflections | 41129 | 8079 |
<I/σ(I)> | 14 | |
Completeness [%] | 98.9 | |
Redundancy | 2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 0.2M ammonium acetate, 0.1M tri-sodium citrate dihydrate pH5.6, 30% w/v PEG4000 |