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6VAS

Assembly of VIQKI I454(beta-L-homoisoleucine)with human parainfluenza virus type 3 (HPIV3) fusion glycoprotein N-terminal heptad repeat domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-G
Synchrotron siteAPS
Beamline21-ID-G
Temperature [K]100
Detector technologyCCD
Collection date2019-08-02
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97856
Spacegroup nameP 3 2 1
Unit cell lengths50.630, 50.630, 76.050
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution28.730 - 1.490
R-factor0.2464
Rwork0.245
R-free0.26210
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6nro
RMSD bond length0.003
RMSD bond angle0.455
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]28.7301.543
High resolution limit [Å]1.4901.490
Rmeas0.1082.094
Rpim0.0240.448
Number of reflections189361814
<I/σ(I)>15.961.63
Completeness [%]99.798.53
Redundancy21.121.7
CC(1/2)0.9990.682
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.529830 mM sodium nitrate, 30 mM dibasic sodium phosphate, 30 mM ammonium sulfate, 100 mM imidazole/MES monohydrate (pH 6.5), 12.5% PEG1000, 12.5% PEG3350, 12.5% 2-methyl-2,4-pentanediol

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PDB entries from 2024-10-30

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