6V3V
Assembly of VIQKI I456(beta-L-homoisoleucine)with human parainfluenza virus type 3 (HPIV3) fusion glycoprotein N-terminal heptad repeat domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-08-02 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97856 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 39.340, 52.200, 56.660 |
Unit cell angles | 90.00, 98.42, 90.00 |
Refinement procedure
Resolution | 28.020 - 2.170 |
R-factor | 0.2453 |
Rwork | 0.241 |
R-free | 0.28750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6nro |
RMSD bond length | 0.002 |
RMSD bond angle | 0.395 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.020 | 2.248 |
High resolution limit [Å] | 2.170 | 2.170 |
Rmeas | 0.072 | 2.008 |
Rpim | 0.026 | 0.728 |
Number of reflections | 12097 | 1195 |
<I/σ(I)> | 15.31 | 1.17 |
Completeness [%] | 99.5 | 99.5 |
Redundancy | 7.5 | 7.5 |
CC(1/2) | 1.000 | 0.521 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | 30 mM sodium nitrate, 30 mM dibasic sodium phosphate, 30 mM ammonium sulfate, 100 mM HEPES/MOPS buffer (pH 7.5), 12.5% PEG1000, 12.5% PEG3350, 12.5% 2-methyl-2,4-pentanediol |