6V2Q
HLA-B*57:03 presenting the peptide LSSPVTKSF
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-20 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.954 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 50.922, 82.158, 110.821 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.079 - 1.600 |
R-factor | 0.1605 |
Rwork | 0.159 |
R-free | 0.19430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2rfx |
RMSD bond length | 0.009 |
RMSD bond angle | 1.102 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.16_3549: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.270 | 1.630 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.127 | 1.040 |
Number of reflections | 62191 | 3036 |
<I/σ(I)> | 11.5 | 2.6 |
Completeness [%] | 100.0 | 100 |
Redundancy | 7.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.4 | 294 | 20 % PEG 4000, 0.2 M ammonium acetate, 0.1 M tri-sodium citrate pH 5.4 |