6V2O
HLA-B*57:01 presenting the peptide ASLNLPAVSW
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-10 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.954 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 50.762, 81.950, 110.487 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.975 - 1.270 |
R-factor | 0.1356 |
Rwork | 0.134 |
R-free | 0.15940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2rfx |
RMSD bond length | 0.007 |
RMSD bond angle | 0.943 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.16_3549: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.000 | 1.290 |
High resolution limit [Å] | 1.268 | 1.270 |
Rmerge | 0.049 | 0.690 |
Number of reflections | 121661 | 5564 |
<I/σ(I)> | 15.1 | |
Completeness [%] | 99.3 | 93 |
Redundancy | 6.8 | 6.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.4 | 294 | 20 % PEG 4000, 0.2 M ammonium acetate, 0.1 M tri-sodium citrate pH 5.4 |