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6V2A

Complex of double mutant (T89V,K162T) of E. coli L-asparaginase II with L-Asn

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyPIXEL
Collection date2018-03-15
DetectorDECTRIS EIGER X 4M
Wavelength(s)1.5418
Spacegroup nameC 1 2 1
Unit cell lengths151.439, 62.594, 141.659
Unit cell angles90.00, 117.80, 90.00
Refinement procedure
Resolution25.980 - 2.000
R-factor0.1598
Rwork0.157
R-free0.20880
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3eca
RMSD bond length0.014
RMSD bond angle1.893
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0253)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]40.00040.0002.030
High resolution limit [Å]2.0005.4202.000
Rmerge0.0390.0140.509
Rmeas0.0480.0160.633
Rpim0.0270.0090.371
Total number of observations207458
Number of reflections7317540633421
<I/σ(I)>15.5
Completeness [%]92.69986.7
Redundancy2.83.42.6
CC(1/2)0.9990.690
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.7293Crystals grown at 0.17 M sodium citrate (pH 6) and 17-18% (w/v) PEG3350. Soaked for 1-2 minutes (empirically determined for each crystal) in equivalent solution with 0.025% (w/v) glutaraldehyde. Finally transferred and soaked for 3-5 min in solution containing 40% (w/v) PEG3350, 5 mM L-Asn, and 0.17 M sodium citrate (pH 4.7)

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PDB entries from 2024-05-15

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