6V0U
Crystal structure of the first bromodomain (BD1) of human BRD4 bound to bromosporine
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-ID |
| Synchrotron site | APS |
| Beamline | 22-ID |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-02-15 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 38.850, 42.990, 79.070 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 34.868 - 1.400 |
| R-factor | 0.1691 |
| Rwork | 0.168 |
| R-free | 0.18530 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3mxf |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.888 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.11.1-2575_3260) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 34.868 | 34.868 | 1.440 |
| High resolution limit [Å] | 1.400 | 6.260 | 1.400 |
| Rmerge | 0.052 | 0.034 | 0.344 |
| Rmeas | 0.056 | 0.037 | 0.370 |
| Total number of observations | 191810 | ||
| Number of reflections | 26636 | 356 | 1916 |
| <I/σ(I)> | 23.25 | 46.25 | 5.67 |
| Completeness [%] | 99.4 | 99.7 | 98.4 |
| Redundancy | 7.201 | 6.14 | 7.24 |
| CC(1/2) | 0.999 | 0.998 | 0.953 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.2 M (NH4)2SO4, 0.1 M Tris (pH 8.5), and 25% PEG 3350 |






