Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6V04

DynU16 crystal structure, a putative protein in the dynemicin biosynthetic locus

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2018-04-15
DetectorDECTRIS EIGER X 9M
Wavelength(s)1.0000
Spacegroup nameP 31 2 1
Unit cell lengths73.171, 73.171, 123.944
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution34.610 - 1.500
R-factor0.1631
Rwork0.162
R-free0.18820
Structure solution methodSIRAS
RMSD bond length0.005
RMSD bond angle0.831
Data reduction softwareXDS (Nov 11, 2017)
Data scaling softwareXDS (Nov 11, 2017)
Phasing softwareSHELX (2016/1)
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]44.31044.3101.600
High resolution limit [Å]1.5004.4901.500
Rmerge0.0420.0310.715
Rmeas0.0440.0330.806
Number of reflections112506441313993
<I/σ(I)>23.1669.781.39
Completeness [%]95.399.473.1
Redundancy8.97410.2464.637
CC(1/2)1.0000.9990.799
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.52931ul:1ul, 0.1M Tris-HCl pH8.5, 0.2M MgCl2, 20% PEG 8000

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon