6UWJ
Intermediate engineered variant of I-OnuI meganuclease with improved thermostability and partially altered specificity
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 108 |
Detector technology | PIXEL |
Collection date | 2019-04-25 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.977 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 38.288, 62.586, 157.405 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.985 - 1.852 |
R-factor | 0.1935 |
Rwork | 0.191 |
R-free | 0.23420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3qqy |
RMSD bond length | 0.010 |
RMSD bond angle | 1.136 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.8.1) |
Refinement software | PHENIX (1.13) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.920 |
High resolution limit [Å] | 1.850 | 3.990 | 1.850 |
Rmerge | 0.035 | 0.027 | 0.162 |
Rmeas | 0.037 | 0.028 | 0.175 |
Rpim | 0.011 | 0.008 | 0.063 |
Total number of observations | 374757 | ||
Number of reflections | 33122 | 3578 | 3166 |
<I/σ(I)> | 20.2 | ||
Completeness [%] | 99.7 | 99.9 | 96.7 |
Redundancy | 11.3 | 11.6 | 7.3 |
CC(1/2) | 0.999 | 0.988 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 100mM sodium acetate pH 6.0, 200mM calcium acetate, 35% PEG 400 |