6UVQ
Crystal structure of Apo AtmM
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-08-15 |
Detector | DECTRIS PILATUS3 X 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 1 2 1 |
Unit cell lengths | 69.463, 52.997, 70.842 |
Unit cell angles | 90.00, 93.34, 90.00 |
Refinement procedure
Resolution | 42.411 - 1.840 |
R-factor | 0.1827 |
Rwork | 0.181 |
R-free | 0.22380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3bus |
Data reduction software | DIALS (1.8.2-g5331de77-release) |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.0) |
Refinement software | PHENIX (1.16) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 51.030 | 51.030 | 1.890 |
High resolution limit [Å] | 1.840 | 8.230 | 1.840 |
Rmerge | 0.086 | 0.043 | 0.757 |
Rmeas | 0.103 | 0.053 | 0.977 |
Rpim | 0.057 | 0.030 | 0.609 |
Total number of observations | 132128 | 1670 | 5296 |
Number of reflections | 43534 | 552 | 2538 |
<I/σ(I)> | 6.6 | 12.8 | 1 |
Completeness [%] | 97.0 | 99.2 | 76.9 |
Redundancy | 3 | 3 | 2.1 |
CC(1/2) | 0.993 | 0.997 | 0.498 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.20M Magnesium acetate, PEG3350 and 2Deoxyadenosine 5triphosphate disodium salt , Benzidine, Carnitine hydrochloride, Sulfanilamide, Cytosine and 0.02M HEPES sodium pH 6.8 |