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6UV4

Crystal structure of the core domain of RNA helicase DDX17 with RNA pri-18a-oligo1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2019-03-20
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.9792
Spacegroup nameP 41 2 2
Unit cell lengths62.504, 62.504, 231.196
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.545 - 1.700
R-factor0.1738
Rwork0.172
R-free0.20400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)DDX17_rU10
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareMOLREP
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.730
High resolution limit [Å]1.6901.700
Rmeas0.1683.717
Number of reflections524882555
<I/σ(I)>36.1
Completeness [%]99.9
Redundancy22.9
CC(1/2)0.9960.550
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.1M sodium acetate pH 4.6, 0.1M sodium chloride, 14% MDP, 10 mM CaCl2

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