6UTB
CRYSTAL STRUCTURE OF UNLIGANDED HIV-1 LM/HT CLADE A/E CRF01 GP120 CORE
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-28 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.92007 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 66.901, 67.687, 86.470 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.511 - 2.500 |
R-factor | 0.2646 |
Rwork | 0.263 |
R-free | 0.30540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3tgt |
RMSD bond length | 0.006 |
RMSD bond angle | 0.989 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.15.2_3472: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.560 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.165 | |
Number of reflections | 13726 | 2025 |
<I/σ(I)> | 6.1 | 1 |
Completeness [%] | 96.7 | 62.3 |
Redundancy | 4 | 3.2 |
CC(1/2) | 0.980 | 0.700 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | 10% PEG 1500, 10% PEG 400, 0.1 M HEPES pH 7.5 |