6UOD
Asparaginase II from Escherichia coli
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE W01B-MX2 |
Synchrotron site | LNLS |
Beamline | W01B-MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-08-30 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.4588 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 152.215, 60.084, 142.786 |
Unit cell angles | 90.00, 117.99, 90.00 |
Refinement procedure
Resolution | 38.578 - 2.400 |
R-factor | 0.2004 |
Rwork | 0.198 |
R-free | 0.25150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ihd |
Data reduction software | XDS (VERSION Jan 26, 2018 BUILT=20180808) |
Data scaling software | XDS (VERSION Jan 26, 2018 BUILT=20180808) |
Phasing software | MrBUMP (00.9.00) |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.108 | 47.108 | 2.450 |
High resolution limit [Å] | 2.310 | 6.880 | 2.310 |
Rmerge | 0.034 | 0.017 | 0.142 |
Rmeas | 0.047 | 0.023 | 0.193 |
Total number of observations | 148792 | ||
Number of reflections | 87788 | 3364 | 12027 |
<I/σ(I)> | 13.85 | 35.06 | 3.53 |
Completeness [%] | 90.0 | 90 | 76.5 |
Redundancy | 1.695 | 1.762 | 1.474 |
CC(1/2) | 0.998 | 0.999 | 0.967 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.9 | 298 | 0.2 M Magnesium acetate tetrahydrate, 20% w/v Polyethylene glycol 3,350, L-Aspartic 1 mM |