6UFH
Co-crystal structure of M. tuberculosis ileS T-box in complex with tRNA-3'-2'3'cyclic phosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 273.15 |
Detector technology | PIXEL |
Collection date | 2019-04-20 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.979180 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 76.276, 61.430, 122.520 |
Unit cell angles | 90.00, 93.97, 90.00 |
Refinement procedure
Resolution | 62.680 - 3.104 |
R-factor | 0.2247 |
Rwork | 0.220 |
R-free | 0.26890 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 122.230 | 122.230 | 3.320 |
High resolution limit [Å] | 3.100 | 8.780 | 3.100 |
Rmerge | 0.086 | 0.026 | 1.414 |
Rmeas | 0.102 | 0.031 | 1.689 |
Rpim | 0.054 | 0.017 | 0.911 |
Total number of observations | 70797 | 3031 | 11603 |
Number of reflections | 20442 | 945 | 3525 |
<I/σ(I)> | 7.2 | 33.2 | 1 |
Completeness [%] | 98.5 | 97.3 | 95 |
Redundancy | 3.5 | 3.2 | 3.3 |
CC(1/2) | 0.999 | 0.999 | 0.755 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 289.15 | 10% PEG 4000, 50 mM sodium cacodylate pH 6.5, 200 mM KCl, 15 mM MgCl2 |