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6UE2

1.85 Angstrom Resolution Crystal Structure of Class D beta-lactamase from Clostridium difficile 630

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2019-06-19
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97872
Spacegroup nameP 21 21 21
Unit cell lengths84.983, 93.200, 137.583
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.560 - 1.850
R-factor0.1666
Rwork0.165
R-free0.19680
Structure solution methodSAD
RMSD bond length0.006
RMSD bond angle1.428
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareHKL-3000
Refinement softwareREFMAC (5.8.0253)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.880
High resolution limit [Å]1.8501.850
Rmerge0.0740.794
Rmeas0.0790.871
Rpim0.0300.353
Number of reflections932184591
<I/σ(I)>25.62.3
Completeness [%]99.999.2
Redundancy7.15.9
CC(1/2)0.710
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7292Protein: 8.25 mg/ml, 0.01M Tris pH 8.3; Screen: PACT (C4), 0.1 M PCB buffer pH 7.0, 25% (w/v) PEG 1500

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