6UBL
Structure of DynF from the Dynemicin Biosynthesis Pathway of Micromonospora chersina
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-12 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0332 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 59.830, 116.126, 129.877 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.716 - 1.499 |
R-factor | 0.1625 |
Rwork | 0.161 |
R-free | 0.18510 |
Structure solution method | SIRAS |
Data reduction software | XDS (VERSION Jan 26, 2018 BUILT=20180409) |
Data scaling software | XSCALE |
Phasing software | SHELX (2013/2) |
Refinement software | PHENIX (1.16) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 34.716 | 34.716 | 1.590 |
High resolution limit [Å] | 1.499 | 4.460 | 1.499 |
Rmerge | 0.056 | 0.029 | 1.661 |
Rmeas | 0.061 | 0.031 | 1.904 |
Number of reflections | 70922 | 2932 | 10132 |
<I/σ(I)> | 14.13 | 52.06 | 0.63 |
Completeness [%] | 97.6 | 99.6 | 87.1 |
Redundancy | 6.204 | 6.355 | 3.88 |
CC(1/2) | 0.999 | 0.999 | 0.373 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 25% (w/v) PEG 1500, 0.1 M PCB buffer, pH 7.0 |