6UBA
Crystal structure of a GH128 (subgroup VI) exo-beta-1,3-glucanase from Aureobasidium namibiae (AnGH128_VI) in complex with laminaritriose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE W01B-MX2 |
Synchrotron site | LNLS |
Beamline | W01B-MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-12 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 1.458570 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 121.262, 152.798, 169.423 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.350 - 2.400 |
R-factor | 0.2377 |
Rwork | 0.237 |
R-free | 0.25560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ub8 |
RMSD bond length | 0.004 |
RMSD bond angle | 1.276 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.350 | 2.540 |
High resolution limit [Å] | 2.400 | 2.400 |
Number of reflections | 123227 | 19656 |
<I/σ(I)> | 6.24 | 1.15 |
Completeness [%] | 99.0 | |
Redundancy | 11.9 | |
CC(1/2) | 0.990 | 0.602 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.18 M tri-ammonium citrate, 18% v/v PEG 3350, 0.01 M Cobalt (II) chloride |