6UAR
Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase from Amycolatopsis mediterranei (AmGH128_I) in complex with laminaritriose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE W01B-MX2 |
Synchrotron site | LNLS |
Beamline | W01B-MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-11-11 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.239850 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 37.758, 77.980, 46.228 |
Unit cell angles | 90.00, 102.45, 90.00 |
Refinement procedure
Resolution | 36.900 - 1.400 |
R-factor | 0.1698 |
Rwork | 0.169 |
R-free | 0.18170 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.014 |
RMSD bond angle | 1.803 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.150 | 1.490 |
High resolution limit [Å] | 1.400 | 1.400 |
Number of reflections | 48504 | 7301 |
<I/σ(I)> | 15.73 | |
Completeness [%] | 94.7 | |
Redundancy | 4.62 | |
CC(1/2) | 0.999 | 0.672 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 291 | 8% PEG20000 8% PEGMME 550 0.1 M sodium acetate 0.2 M magnesium chloride |