6U7D
Recombinant stem bromelain precursor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 193 |
Detector technology | CCD |
Collection date | 2018-05-02 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.953695 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 64.310, 69.940, 74.250 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.380 - 3.000 |
R-factor | 0.2032 |
Rwork | 0.198 |
R-free | 0.31380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6okj |
RMSD bond length | 0.007 |
RMSD bond angle | 1.620 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA |
Phasing software | PHENIX |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.380 | 3.180 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.070 | 0.844 |
Rmeas | 0.265 | 0.879 |
Rpim | 0.095 | 0.228 |
Number of reflections | 7132 | 1130 |
<I/σ(I)> | 10.7 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 14.2 | 14.5 |
CC(1/2) | 0.992 | 0.903 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4 | 293 | A reservoir solution comprised of 19% (w/v) PEG6000, 0.01 M Zinc chloride and 0.1 M MMT, pH4. Using an equal reservoir to protein (8 mg/ml) ratio, crystals were observed after 1 day and grew to maximal size after 2 week. |