Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6U50

Anti-Sudan ebolavirus Nucleoprotein Single Domain Antibody Sudan B (SB)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2017-01-31
DetectorRIGAKU RAXIS HTC
Wavelength(s)1.54178
Spacegroup nameP 31 2 1
Unit cell lengths47.839, 47.839, 85.378
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution37.270 - 1.600
R-factor0.1736
Rwork0.169
R-free0.21400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6u51
RMSD bond length0.009
RMSD bond angle0.961
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.15.2_3472)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.6901.680
High resolution limit [Å]1.6001.600
Rmeas0.1421.820
Rpim0.0450.605
Number of reflections155582140
<I/σ(I)>12.11.3
Completeness [%]99.496.2
Redundancy9.78.5
CC(1/2)0.9990.367
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP27737.5% precipitant mix (2-methyl-2,4-pentanediol, polyethylene glycol [PEG] 1000, PEG 3350), 0.1 M amino acids mix (glutamate, alanine, glycine, lysine, serine), 0.1 M HEPES/MOPS pH 7.5 {Molecular Dimensions Morpheus HT-96 Condition H8}

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon