6TYZ
Structure of Ku80 von Willebrand domain complexed with APLF Ku Binding Motif
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-08-01 |
Detector | RIGAKU SATURN 944 |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 43.807, 71.189, 79.527 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.443 - 1.511 |
R-factor | 0.179194856937 |
Rwork | 0.178 |
R-free | 0.20256 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6tyv |
RMSD bond length | 0.007 |
RMSD bond angle | 0.832 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.540 |
High resolution limit [Å] | 1.510 | 1.510 |
Rmeas | 0.049 | 0.540 |
Number of reflections | 39709 | 1922 |
<I/σ(I)> | 50 | |
Completeness [%] | 99.8 | |
Redundancy | 5.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 0.1 M HEPES pH 7.5, 20% (w/v) PEG4000 |