Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6TYT

Structure of Ku80 von Willebrand domain S229A mutant complexed with APLF and XLF Ku Binding Motif

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-BM
Synchrotron siteAPS
Beamline22-BM
Temperature [K]100
Detector technologyCCD
Collection date2019-06-07
DetectorMAR CCD 130 mm
Wavelength(s)1
Spacegroup nameC 2 2 21
Unit cell lengths43.642, 79.407, 146.174
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution34.888 - 2.403
R-factor0.226705772622
Rwork0.225
R-free0.25953
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6tyz
RMSD bond length0.002
RMSD bond angle0.378
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.390
High resolution limit [Å]2.3502.350
Rmeas0.4100.643
Number of reflections10611410
<I/σ(I)>43
Completeness [%]97.0
Redundancy5.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2950.1 M HEPES NaOH pH 7.5, 25 % (w/v) PEG3350

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon