6TWJ
Apo structure of the Ectoine utilization protein EutD (DoeA) from Halomonas elongata
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-06 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.966 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 120.370, 123.140, 61.490 |
Unit cell angles | 90.00, 97.18, 90.00 |
Refinement procedure
Resolution | 43.340 - 2.150 |
R-factor | 0.2294 |
Rwork | 0.228 |
R-free | 0.26240 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2bws |
RMSD bond length | 0.005 |
RMSD bond angle | 0.761 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.720 | 2.227 |
High resolution limit [Å] | 2.150 | 2.150 |
Rmerge | 0.087 | 0.621 |
Number of reflections | 47539 | 4593 |
<I/σ(I)> | 8.96 | 1.58 |
Completeness [%] | 98.3 | |
Redundancy | 3 | |
CC(1/2) | 0.995 | 0.659 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M trisodium citrate, 20% (wt/vol) PEG 3350 |