Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6TSR

Marasmius oreades agglutinin (MOA) activated by manganese (II) and calcium

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyCCD
Collection date2012-10-08
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)1.85051
Spacegroup nameP 63 2 2
Unit cell lengths121.569, 121.569, 99.584
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution46.500 - 1.850
Rwork0.152
R-free0.17550
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3ef2
RMSD bond length0.014
RMSD bond angle0.954
Data reduction softwareXDS (March 15, 2012)
Data scaling softwareXDS (March 15, 2012)
Phasing softwarePHASER (7.0.078)
Refinement softwareREFMAC (7.0.078)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.5001.890
High resolution limit [Å]1.8501.850
Rmerge0.0610.492
Rmeas0.0550.677
Rpim0.0300.463
Number of reflections687971973
<I/σ(I)>22.8
Completeness [%]97.587.3
Redundancy3.22.6
CC(1/2)0.9980.623
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5293.150.1 M cacodylate/HCl pH 6.5, 16% PEG 8000, 0.15M sodium acetate, 10 mM MnCl2, 10 mM CaCl2, 12.5% DMSO, 5mM DTT

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon