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6TRJ

LEDGF/p75 IBD dimer

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyPIXEL
Collection date2017-11-30
DetectorDECTRIS PILATUS 300K
Wavelength(s)1.54187
Spacegroup nameP 31 2 1
Unit cell lengths58.748, 58.748, 48.232
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution50.880 - 1.300
R-factor0.1393
Rwork0.137
R-free0.17670
Structure solution methodAB INITIO PHASING
RMSD bond length0.014
RMSD bond angle1.518
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareArcimboldo
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.88050.8801.380
High resolution limit [Å]1.3003.8801.300
Rmerge0.0430.0330.827
Rmeas0.0470.0351.001
Total number of observations120531
Number of reflections220489842550
<I/σ(I)>17.6558.810.96
Completeness [%]91.899.866.5
Redundancy5.4678.2912.615
CC(1/2)0.9990.9990.498
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2910.1M DL-Glutamic acid monohydrate; 0.1M DL-Alanine; 0.1M Glycine; 0.1M DL-Lysine monohydrochloride; 0.1M DL-Serine; 0.1 M Tris (base); BICINE pH 8.5; 20% v/v Glycerol; 10% w/v PEG 4000 (Morpheus Molecular Dimensions condition H11)

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PDB entries from 2024-10-30

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