6TRJ
LEDGF/p75 IBD dimer
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-30 |
Detector | DECTRIS PILATUS 300K |
Wavelength(s) | 1.54187 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 58.748, 58.748, 48.232 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 50.880 - 1.300 |
R-factor | 0.1393 |
Rwork | 0.137 |
R-free | 0.17670 |
Structure solution method | AB INITIO PHASING |
RMSD bond length | 0.014 |
RMSD bond angle | 1.518 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | Arcimboldo |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.880 | 50.880 | 1.380 |
High resolution limit [Å] | 1.300 | 3.880 | 1.300 |
Rmerge | 0.043 | 0.033 | 0.827 |
Rmeas | 0.047 | 0.035 | 1.001 |
Total number of observations | 120531 | ||
Number of reflections | 22048 | 984 | 2550 |
<I/σ(I)> | 17.65 | 58.81 | 0.96 |
Completeness [%] | 91.8 | 99.8 | 66.5 |
Redundancy | 5.467 | 8.291 | 2.615 |
CC(1/2) | 0.999 | 0.999 | 0.498 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.1M DL-Glutamic acid monohydrate; 0.1M DL-Alanine; 0.1M Glycine; 0.1M DL-Lysine monohydrochloride; 0.1M DL-Serine; 0.1 M Tris (base); BICINE pH 8.5; 20% v/v Glycerol; 10% w/v PEG 4000 (Morpheus Molecular Dimensions condition H11) |