6TQD
D00-D0 domain of Intimin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-03-31 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 1 |
Unit cell lengths | 56.039, 65.473, 79.378 |
Unit cell angles | 77.78, 76.55, 84.76 |
Refinement procedure
Resolution | 24.830 - 1.480 |
R-factor | 0.1807 |
Rwork | 0.179 |
R-free | 0.21550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1f00 |
RMSD bond length | 0.005 |
RMSD bond angle | 0.708 |
Data reduction software | xia2 |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 24.830 | 1.532 |
High resolution limit [Å] | 1.479 | 1.479 |
Rmerge | 0.129 | 0.573 |
Rmeas | 0.696 | |
Number of reflections | 175969 | 16162 |
<I/σ(I)> | 6.4 | 1.54 |
Completeness [%] | 98.2 | |
Redundancy | 4.6 | |
CC(1/2) | 0.979 | 0.354 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | D00-D0 50 mg/ml. in 400mM NaCl 10 mM Hepes pH 7.5. Reservoir solution 150 mM KBr. 30% PEG2000mme |