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6TOU

Rabies virus glycoprotein PH domain in complex with the scFv fragment of broadly neutralizing human antibody RVC20

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 2
Synchrotron siteSOLEIL
BeamlinePROXIMA 2
Temperature [K]100
Detector technologyPIXEL
Collection date2019-06-01
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.9801
Spacegroup nameP 41 21 2
Unit cell lengths81.945, 81.945, 155.927
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.506 - 2.587
R-factor0.1932
Rwork0.190
R-free0.22500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Phyre2 homology model of RVC20 scFv
RMSD bond length0.003
RMSD bond angle0.607
Data reduction softwareXDS
Data scaling softwareSTARANISO
Phasing softwarePHENIX (1.10.1_2155)
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.5062.720
High resolution limit [Å]2.5872.587
Rmeas0.1063.758
Rpim0.0210.705
Number of reflections15457774
<I/σ(I)>21.374
Completeness [%]89.533.3
Redundancy25.728.1
CC(1/2)0.9990.660
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8291.150.7 uL of 18 mg/mL complex in 20 mM Tris-Cl pH 8.0, 150 mM NaCl were added to 0.7 uL of reservoir solution containing 100 mM Tris-Cl pH 8.0, 300 mM CaCl2, 22% w/v PEG4000

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PDB entries from 2024-07-31

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