6TO1
Crystal structure of three N-terminal domains of the type V pili tip protein Mfa5 from Porphyromonas gingivalis
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | BESSY BEAMLINE 14.1 |
| Synchrotron site | BESSY |
| Beamline | 14.1 |
| Temperature [K] | 290 |
| Detector technology | PIXEL |
| Collection date | 2016-09-30 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.9756 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 50.720, 72.810, 184.490 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 46.980 - 1.800 |
| R-factor | 0.1629 |
| Rwork | 0.161 |
| R-free | 0.19980 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6tnj |
| RMSD bond length | 0.011 |
| RMSD bond angle | 0.985 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.14_3228) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 46.980 | 1.863 |
| High resolution limit [Å] | 1.799 | 1.799 |
| Rmerge | 0.097 | 1.126 |
| Rmeas | 0.101 | 1.180 |
| Rpim | 0.028 | 0.344 |
| Number of reflections | 64113 | 6117 |
| <I/σ(I)> | 19.66 | 1.87 |
| Completeness [%] | 99.5 | 95.94 |
| Redundancy | 13.1 | 11.1 |
| CC(1/2) | 0.999 | 0.646 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 291 | 17% PEG3350, 80mM NaPO4 pH6, 3mM CaCL and 3mM MgCL |






