6TLY
Crystal structure of the unconventional kinetochore protein Bodo saltans KKT2 central domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-15 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 1.28297 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 38.961, 53.512, 83.294 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.000 - 1.800 |
R-factor | 0.1963 |
Rwork | 0.195 |
R-free | 0.22490 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 0.960 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | CRANK2 |
Refinement software | BUSTER (2.10.3 (3-OCT-2019)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.020 | 45.040 | 1.830 |
High resolution limit [Å] | 1.800 | 4.880 | 1.800 |
Rmerge | 0.102 | 0.072 | 0.520 |
Rpim | 0.050 | 0.035 | 0.330 |
Number of reflections | 8158 | 459 | 334 |
<I/σ(I)> | 8.7 | ||
Completeness [%] | 97.1 | 97.9 | 77.9 |
Redundancy | 4.6 | 4.2 | 2.8 |
CC(1/2) | 0.990 | 0.990 | 0.780 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 277 | 40% PEG 400, 0.2 mM (NH4)2SO4, 100 mM Tris-HCL pH 8 |