6TJU
X-ray structure of C-terminal domain of human T-cell lymphotropic virus type 1 (HTLV-1)
This is a non-PDB format compatible entry.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04 |
| Synchrotron site | Diamond |
| Beamline | I04 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-05-10 |
| Detector | DECTRIS PILATUS3 S 6M |
| Wavelength(s) | 0.9795 |
| Spacegroup name | I 41 3 2 |
| Unit cell lengths | 97.408, 97.408, 97.408 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 39.770 - 1.800 |
| Rwork | 0.177 |
| R-free | 0.24640 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5llj |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.861 |
| Data reduction software | xia2 |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 39.770 | 1.840 |
| High resolution limit [Å] | 1.800 | 1.800 |
| Rmerge | 0.077 | 0.711 |
| Rmeas | 0.095 | |
| Rpim | 0.055 | 0.503 |
| Number of reflections | 41483 | 2513 |
| <I/σ(I)> | 7.4 | 1.8 |
| Completeness [%] | 100.0 | |
| Redundancy | 5.4 | |
| CC(1/2) | 0.993 | 0.354 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 1.2 M ammonium tartrate dibasic, 150 mM NaCl |
