6TJH
Crystal structure of the computationally designed Cake9 protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-02 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97857 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 58.966, 106.801, 116.490 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.540 - 1.430 |
R-factor | 0.1662 |
Rwork | 0.165 |
R-free | 0.19340 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Computationally designed model of Cake9 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.195 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.540 | 1.450 |
High resolution limit [Å] | 1.430 | 1.430 |
Rmerge | 0.088 | 0.973 |
Rmeas | 0.093 | 1.023 |
Rpim | 0.028 | 0.311 |
Number of reflections | 136299 | 6699 |
<I/σ(I)> | 14 | 3.2 |
Completeness [%] | 100.0 | 100 |
Redundancy | 11 | 10.7 |
CC(1/2) | 0.997 | 0.945 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 2.0M Sodium chloride, 2.0M Amonium sulfate |