6TIG
Structure of the N terminal domain of Bc2L-C lectin (1-131) in complex with Globo H (H-type 3) antigen
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-13 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97857 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 74.368, 42.882, 102.648 |
Unit cell angles | 90.00, 96.01, 90.00 |
Refinement procedure
Resolution | 37.100 - 1.900 |
Rwork | 0.165 |
R-free | 0.22650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6tid |
RMSD bond length | 0.015 |
RMSD bond angle | 1.998 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.3) |
Phasing software | PHASER (2.8.2) |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.100 | 1.940 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.077 | 0.363 |
Rmeas | 0.105 | 0.486 |
Rpim | 0.071 | 0.320 |
Number of reflections | 25081 | 1628 |
<I/σ(I)> | 8.7 | 2.9 |
Completeness [%] | 97.9 | 97 |
Redundancy | 3.5 | 3.5 |
CC(1/2) | 0.995 | 0.861 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 292 | Sodium citrate 1.2M |