Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6THH

Crystal structure of type I-D CRISPR-Cas nuclease Cas10d in complex with the SIRV3 AcrID1 (gp02) anti-CRISPR protein

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2019-09-20
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9793
Spacegroup nameP 43 21 2
Unit cell lengths157.990, 157.990, 130.240
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution67.542 - 3.480
R-factor0.2379
Rwork0.236
R-free0.25380
Structure solution methodSAD
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareSHELXDE
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]67.5423.600
High resolution limit [Å]3.4803.480
Rmerge0.0600.680
Number of reflections217132139
<I/σ(I)>11.91.2
Completeness [%]99.999.8
Redundancy22
CC(1/2)0.9900.600
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52920.1 M Hepes 7.5, 2% (w/v) PEG 8000, 5% ethylene glycol

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon