6THA
Crystal structure of human sugar transporter GLUT1 (SLC2A1) in the inward conformation
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-05 |
Detector | DECTRIS PILATUS3 R CdTe 300K |
Wavelength(s) | 0.9686 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 120.000, 102.180, 69.000 |
Unit cell angles | 90.00, 98.89, 90.00 |
Refinement procedure
Resolution | 41.656 - 2.400 |
R-factor | 0.2057 |
Rwork | 0.204 |
R-free | 0.22940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4pyp |
RMSD bond length | 0.004 |
RMSD bond angle | 0.650 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (dev-2614) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 41.656 | 41.656 | 2.500 |
High resolution limit [Å] | 2.400 | 20.000 | 2.400 |
Rmerge | 0.113 | 0.027 | 2.218 |
Rmeas | 0.123 | 0.033 | 2.380 |
Total number of observations | 229827 | ||
Number of reflections | 32166 | 52 | 3666 |
<I/σ(I)> | 7.2 | 17.59 | 0.72 |
Completeness [%] | 99.9 | 83.9 | 100 |
Redundancy | 7.145 | 3.135 | 7.611 |
CC(1/2) | 0.998 | 0.998 | 0.444 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 290.15 | 42-46 % polyethylene glycol 400, 100-200 mM MgCl2 and 100 mM Mops pH 7.4 |