6TEW
Crystal structure of human protein kinase CK2alpha' (CSNK2A2 gene product) in complex with the 2-aminothiazole-type inhibitor 27
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
| Synchrotron site | PETRA III, EMBL c/o DESY |
| Beamline | P13 (MX1) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-09-15 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.9202 |
| Spacegroup name | P 1 |
| Unit cell lengths | 46.108, 47.380, 50.270 |
| Unit cell angles | 113.55, 90.28, 91.19 |
Refinement procedure
| Resolution | 46.090 - 1.082 |
| R-factor | 0.1463 |
| Rwork | 0.146 |
| R-free | 0.16870 |
| Structure solution method | AB INITIO PHASING |
| RMSD bond length | 0.014 |
| RMSD bond angle | 1.203 |
| Data reduction software | XDS |
| Data scaling software | autoPROC |
| Phasing software | Arcimboldo |
| Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 46.094 | 1.211 |
| High resolution limit [Å] | 1.082 | 1.082 |
| Rmerge | 0.063 | 1.585 |
| Rmeas | 0.068 | 1.718 |
| Rpim | 0.026 | 0.654 |
| Number of reflections | 106454 | 5323 |
| <I/σ(I)> | 12 | |
| Completeness [%] | 64.0 | |
| Redundancy | 6.9 | |
| CC(1/2) | 0.999 | 0.497 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | RESERVOIR COMPOSITION: 28 % (W/V) PEG6000, 0.9 M LICL, 0.1 M, TRIS/HCL, PH 8.5; CRYSTALLIZATION DROP COMPOSITION PRIOR TO EQUILIBRATION: 0.01 ML RESERVOIR SOLUTION PLUS 0.02 ML CK2ALPHA' (MUTANT CYS336SER)/INHIBITOR MB002 MIXTURE (0.180 ML 6 MG/ML CK2ALPHA-'CYS336SER, 0.5 M NACL, 25 MM TRIS/HCL, PH 8.5, MIXED AND PRE-EQUILIBRATED WITH 0.02 ML 10 MM MB002 IN DIMETHYL SULFOXIDE); the inhibitor MB002 was replaced by extensive soaking with the 2-aminothiazole-type inhibitor 27; VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K |






