6T9C
Crystal structure of the complex between PPARgamma LBD and the ligand NV1346 (3a)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID30B |
| Synchrotron site | ESRF |
| Beamline | ID30B |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-12-12 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.973 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 93.780, 60.980, 119.000 |
| Unit cell angles | 90.00, 103.50, 90.00 |
Refinement procedure
| Resolution | 50.690 - 1.950 |
| R-factor | 0.2317 |
| Rwork | 0.230 |
| R-free | 0.26160 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6qj5 |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.278 |
| Data reduction software | MOSFLM |
| Data scaling software | SCALA |
| Phasing software | AMoRE |
| Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 57.860 | 2.020 |
| High resolution limit [Å] | 1.950 | 1.950 |
| Rmerge | 0.044 | 0.588 |
| Rmeas | 0.062 | 0.831 |
| Rpim | 0.044 | 0.588 |
| Number of reflections | 46141 | 4612 |
| <I/σ(I)> | 5.4 | 0.9 |
| Completeness [%] | 96.4 | 97.2 |
| Redundancy | 1.9 | 1.9 |
| CC(1/2) | 0.994 | 0.377 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 0.8 M Sodium Citrate, 0.15 M Tris |






