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6T8L

Crystal structure of Bacteroides thetaiotamicron EndoBT-3987 with Man9GlcNAc product in P212121

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2018-12-09
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97624
Spacegroup nameP 21 21 21
Unit cell lengths49.377, 76.310, 116.713
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.178 - 1.700
R-factor0.1606
Rwork0.159
R-free0.18870
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3poh
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHENIX
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.17829.178
High resolution limit [Å]1.7001.700
Rmerge0.0800.482
Number of reflections493004854
<I/σ(I)>16.46
Completeness [%]100.0
Redundancy6.6
CC(1/2)0.9990.903
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2910.02 M sodium/potassium phosphate, 100 mM Bis-Tris propane pH 8.5, and 20% (w/v) PEG 3350

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