6T4E
Native C3-like protease from Southampton virus complexed with FMOPL000287a.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.92819 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 62.910, 89.560, 61.370 |
Unit cell angles | 90.00, 96.64, 90.00 |
Refinement procedure
Resolution | 25.620 - 1.660 |
R-factor | 0.1408 |
Rwork | 0.137 |
R-free | 0.21130 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.012 |
RMSD bond angle | 1.894 |
Data reduction software | xia2 |
Data scaling software | Aimless (0.5.27) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 25.620 | 25.620 | 1.700 |
High resolution limit [Å] | 1.660 | 7.420 | 1.660 |
Rmerge | 0.067 | 0.022 | 0.848 |
Rmeas | 0.079 | 0.026 | 1.053 |
Rpim | 0.043 | 0.014 | 0.613 |
Total number of observations | 128715 | ||
Number of reflections | 38595 | 449 | 2774 |
<I/σ(I)> | 12.4 | 1.3 | |
Completeness [%] | 97.1 | 95.3 | 95.9 |
Redundancy | 3.3 | 3.4 | 2.9 |
CC(1/2) | 0.998 | 0.998 | 0.425 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.1 | 294 | Protein concentration 4 mg/ml. 0.2 M ammonium citrate and 12% (v/v) PEG3350. |