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6T46

Structure of the Rap conjugation gene regulator of the plasmid pLS20 in complex with the Phr* peptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2016-03-14
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.12712
Spacegroup nameC 1 2 1
Unit cell lengths116.670, 93.282, 167.687
Unit cell angles90.00, 94.97, 90.00
Refinement procedure
Resolution45.424 - 2.450
R-factor0.2051
Rwork0.202
R-free0.26210
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6t3h
RMSD bond length0.011
RMSD bond angle1.612
Data reduction softwareXDS (Jun 1, 2017)
Data scaling softwareautoPROC (1.0.5)
Phasing softwarePHASER (2.7.17)
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]45.42445.4242.492
High resolution limit [Å]2.4506.6432.450
Rmerge0.0390.0180.788
Rmeas0.0530.0231.074
Rpim0.0370.0160.759
Number of reflections44873695094
<I/σ(I)>141.3
Completeness [%]95.996.42.8
Redundancy2.22.13.2
CC(1/2)0.9950.9930.622
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION6.82902.5% PEG8K, 8% Etilenglicol, 0.1M MES pH6.8, Rap 10mg/mL, 1:5 RAP:Phr (QKGMY)

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