Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6T3N

Structure of Oceanobacillus iheyensis group II intron G-mutant (C289G/C358G/G385C) in the presence of Na+, Mg2+ and 5'-exon

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyCCD
Collection date2013-10-14
DetectorADSC QUANTUM 315
Wavelength(s)0.979180
Spacegroup nameP 21 21 21
Unit cell lengths89.895, 95.271, 217.844
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution32.150 - 3.220
R-factor0.1849
Rwork0.182
R-free0.24180
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3igi
RMSD bond length0.009
RMSD bond angle1.958
Data reduction softwareXDS (VERSION March 30, 2013)
Data scaling softwareSCALA (3.3.20)
Phasing softwarePHASER (2.8.2)
Refinement softwareREFMAC (5.8.0238)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]32.15032.1503.390
High resolution limit [Å]3.21910.1803.220
Rmerge0.0380.542
Rmeas0.0890.0510.695
Rpim0.0390.0250.302
Total number of observations147818275622187
Number of reflections305366984451
<I/σ(I)>14.532.42.4
Completeness [%]98.665.399.7
Redundancy4.83.95
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP730350 mM Na-HEPES pH 7.0, 100 mM magnesium acetate, 150 mM sodium chloride, 4% PEG 8000

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon